Quantitative targeted analysis
Stephan Siebel, MD, PhD
Targeted metabolomics
In addition to relative metabolic flux analysis through MIMOSA, our targeted metabolomics platform offers identification and quantification of key metabolites of central carbon metabolism, such as glycolysis/gluconeogenesis, Krebs cycle, along with select intermediates of ketone and creatine metabolism (see list below).
Metabolite identification is done by retention time and unique precursor to product ion relationships. Absolute quantitation of sample analytes is performed through external calibration using a standard curve for each metabolite.
Additional analysis offered includes readouts of redox potential and energy balance through ratiometric investigation of metabolites involved in reductive and oxidative reactions and/or transfer of phosphate groups from high-energy metabolites.
The list of targeted metabolites is constantly evolving and the Chemical Metabolism Core offers custom method development of metabolites of interest for research groups.
Available to Yale researchers & external researchers
Turnaround time
Please note, the typical turnaround time for data from these services is on average 2 to 3 months but can vary depending on laboratory work load and the complexity of the study.
Metabolites
List of targeted metabolites
3PG
Acetoacetate
Aconitate
aKG
Alanine
Aspartate
Beta-alanine
BHOB
Citrate
Creatine
DHAP
F1,6P
Fumarate
Glutamate
Glutamine
Glycerol3Phosphate
Guanidinoacetate
Isocitrate
Lactate
Lactoylphenylalanine
Malate
Oxaloacetate
PEP
Phenylalanine
Phenyllactate
Phosphocreatine
Propionate
Pyruvate
Succinate
Ratios of RedOX and energy balance
βHOB/Acetoacetate
Carnitine/Acetylcarnitine
Citrate/Isocitrate
F-1,6-BP/DHAP
Fumarate/Malate
Glycerol3Phosphate/DHAP
Isocitrate/αKetoglutarate
Lactate/Pyruvate
Malate/Oxaloacetate
Oxaloacetate/Citrate
PEP/Pyruvate
3PG/PEP
Phosphocreatine/Creatine
Succinate/Fumarate